Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015873089.1_cds_XP_016435015.1_31019
CDS Infomation

[gene=LOC107761305] [db_xref=GeneID:107761305] [protein=probable methylenetetrahydrofolate reductase] [protein_id=XP_016435015.1] [location=join(18024..18189,18500..18735,19459..19519,20024..20106,20244..20417,20993..21166,21277..21377,21458..21569,22289..22369,22449..22626,24044..24378,25014..25097)] [gbkey=CDS]
Sequence

ATGAAGGTAATTGACAAAATTAACGAATCCGCGAAAACTGACAGAGTAGTTTTCTCCTTT
GAATTCTTTCCCCCAAAAACTGAAGATGGGGTTGATAATTTGTTCGAAAGAATGGAAAGA
ATGGTCTCACATAATCCCTCTTTCTGTGATATTACATGGGGTGCAGGTGGATCAACAGCA
GATCTGACACTTGAGATTGCAAACAGAATGCAGAACATGGTTTGTGTTGAAACCATGATG
CATTTGACTTGTACGAATATGCCTGTTGAGAAAATTGATCATGCCCTTGAAACTATCAAG
TCTAATGGGATTCAAAATGTTCTTGCTCTTCGCGGTGATCCTCCTCATGGACAAGATAAG
TTTGTTCAAGTTGAAGGTGGTTTTGCCTGTGCCTTAGATCTGGTAAAGCATATGCGGGCC
AAGTATGGGGACTACTTTGGGATAACTGTTGCGGGTTACCCAGAGGCACATCCTGATGTT
ATACCTGCCACTGGAATAGCTACACAAGAGACATATGAAAATGACCTTGCCTATCTCAAA
AAGAAGGTTGATGCTGGAGCTGATCTCATTGTCACTCAACTCTTCTATGATACTGATATT
TTCCTCAAGTTTGTCAATGATTGTCGTCAAATTGGTATAACTTGTCCTATTGTCCCGGGA
ATCATGCCCATCAACAATTATAAGGGCTTCTTGCGCATGACTGGTTTTTGCAAAACCAAG
ATCCCAGCAGATATTACAGCTGCCTTGGAACCGATTAAGGATAACGAAGAAGCTGTCAAA
GCTTACGGAATTCACCAAGCGACCGAAATGTGCAAGAAGATTTTGGCCACTGGCATTAAG
ACCTTGCATCTTTATACGTTAAACATGGAGAAATCAGCTCTAGCCATTTTGATGAATCTT
GGATTGATAGAAGAGTCCAAAATTTCAAGGCCATTACCTTGGAGACGTCCTACAAATGTT
TTCCGTGTTAAAGAAGATGTCCGTCCTATATTCTGGGCCAACCGTCCTAAGAGCTACATT
TCAAGGACCATTGGTTGGGATGAGTATCCACATGGCCGATGGGGCAATGCTCAAAATCCA
TCATATGGAGCACTTAGTGATTATCAGTTCATGAGGGCACGTTCACGTGATAAGAAACTT
CAAGAGGAATGGGCTGTTGCTCTCAACAGTGTGGAAGACATCTATGAGAGATTTATGAAC
TACTGTCTTGGGAAGCTGAGAAGTTGTCCTTGGTCTGAGTTAGATGGGCTTCAGCCAGAG
ACAAAGATCATCGATGAACATTTGGGTAACATAAACACGAAAGGTTTCCTGACTATTAAC
AGCCAACCAGCAGTTAATGGAGCAAAATCTGATGCTCCTTCTATTGGATGGGGCGGCCCT
GGTGGATACGTTTATCAAAAGGCATACTTGGAGTTCTTTTGCTCTCACGAAAAATTGAAT
GCTCTTGTCGAAAAATGCAAGGCTTTCCCCTTCCTTACCTATATGGCTGTGAACAAGGAA
GGAAACTGGATTTCCAACGCCAACCAAACCAATGTCAATGCTGTGACATGGGGAGTTTTC
CCAGGTAAGGAGATTGTACAACCAACGGTGGTTGATCCCGCCAGCTTCATGGTATGGAAG
GATGAGGCATTTGAAATCTGGTCAAGAGGTTGGGCTCAATTATTCCAAGAGAGTGATCCA
TCAAGAAAATTGCTTGAACAAGTTCAGAACAGTTACTTCTTGGTTAGCCTTGTCGACAAC
GATTACATCAATGGAGATTTGTTTGCCATCTTCAAGGATATCTGA

Peptide Sequence

PEP ID

XP_016435015.1
PEP Infomation

PREDICTED: probable methylenetetrahydrofolate reductase [Nicotiana tabacum]
Sequence

MKVIDKINESAKTDRVVFSFEFFPPKTEDGVDNLFERMERMVSHNPSFCDITWGAGGSTA
DLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDK
FVQVEGGFACALDLVKHMRAKYGDYFGITVAGYPEAHPDVIPATGIATQETYENDLAYLK
KKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPIVPGIMPINNYKGFLRMTGFCKTK
IPADITAALEPIKDNEEAVKAYGIHQATEMCKKILATGIKTLHLYTLNMEKSALAILMNL
GLIEESKISRPLPWRRPTNVFRVKEDVRPIFWANRPKSYISRTIGWDEYPHGRWGNAQNP
SYGALSDYQFMRARSRDKKLQEEWAVALNSVEDIYERFMNYCLGKLRSCPWSELDGLQPE
TKIIDEHLGNINTKGFLTINSQPAVNGAKSDAPSIGWGGPGGYVYQKAYLEFFCSHEKLN
ALVEKCKAFPFLTYMAVNKEGNWISNANQTNVNAVTWGVFPGKEIVQPTVVDPASFMVWK
DEAFEIWSRGWAQLFQESDPSRKLLEQVQNSYFLVSLVDNDYINGDLFAIFKDI

Transcript Sequence

Gene sequence data has not been registered.